PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011080803.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 461aa    MW: 51477.4 Da    PI: 7.4232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011080803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-12292335755
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       Er+RR+ri+++++ Lr l+Pk +      K++ a++L  A+eYIk+L+
  XP_011080803.1 292 VTERNRRKRIKDGMFALRALVPKiS------KMDRASTLGDATEYIKELE 335
                     67*********************66......****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.6E-2111160IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000833.63E-11283339No hitNo description
PROSITE profilePS5088815.142285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-15285349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-15287351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-13291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-10292335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2604.9E-4395459No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MAALETVVEW LRPLVRNKPW DYCVIWKLGD DPSRFIEWGA CCCSGGNSPE NIIKVKDENG  60
VEKHLIAECK DRLVKHLVGT NACKKLAQLP SVIPLYSGIH GDVVISKQPR WTTQSNPSAS  120
DDETSGTQVL IPVACGLIEL FSTNHVPRDE KIIDYISARF NINLKQENAN EKDRSNYNLG  180
DKLCDPDHSS FHYLNFLPRI PQPNNYSSFE GSSTCSSLSN EHQLLQIGPD PMFGSMSPEK  240
SSREYVDSPS SSLRLKRKNY TDVSLAQGND QTVAVKIRQK AEKGPYKSKN LVTERNRRKR  300
IKDGMFALRA LVPKISKMDR ASTLGDATEY IKELEETIEN YYDELRTMEE DPSKINDNAK  360
PDLPKLIGDK SAAGGSEKNP VEVKVEVSQL GRKDFLLKLI CNQKRGGFSR LMEAVDSLGL  420
KVTDANVTTL NGSVLNVLQV EANKTEVEPN ALKHSLLQLV N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080803.10.0PREDICTED: transcription factor bHLH90
TrEMBLA0A022S1H81e-175A0A022S1H8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99292227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.12e-75bHLH family protein